Index: third_party/cython/src/Cython/Includes/numpy/__init__.pxd |
diff --git a/third_party/cython/src/Cython/Includes/numpy/__init__.pxd b/third_party/cython/src/Cython/Includes/numpy/__init__.pxd |
new file mode 100644 |
index 0000000000000000000000000000000000000000..f541b9655e048f82f5817ccb895a8a078b12bd98 |
--- /dev/null |
+++ b/third_party/cython/src/Cython/Includes/numpy/__init__.pxd |
@@ -0,0 +1,980 @@ |
+# NumPy static imports for Cython |
+# |
+# If any of the PyArray_* functions are called, import_array must be |
+# called first. |
+# |
+# This also defines backwards-compatability buffer acquisition |
+# code for use in Python 2.x (or Python <= 2.5 when NumPy starts |
+# implementing PEP-3118 directly). |
+# |
+# Because of laziness, the format string of the buffer is statically |
+# allocated. Increase the size if this is not enough, or submit a |
+# patch to do this properly. |
+# |
+# Author: Dag Sverre Seljebotn |
+# |
+ |
+DEF _buffer_format_string_len = 255 |
+ |
+cimport cpython.buffer as pybuf |
+from cpython.ref cimport Py_INCREF, Py_XDECREF |
+from cpython.object cimport PyObject |
+from cpython.type cimport type |
+cimport libc.stdlib as stdlib |
+cimport libc.stdio as stdio |
+ |
+cdef extern from "Python.h": |
+ ctypedef int Py_intptr_t |
+ |
+cdef extern from "numpy/arrayobject.h": |
+ ctypedef Py_intptr_t npy_intp |
+ ctypedef size_t npy_uintp |
+ |
+ cdef enum NPY_TYPES: |
+ NPY_BOOL |
+ NPY_BYTE |
+ NPY_UBYTE |
+ NPY_SHORT |
+ NPY_USHORT |
+ NPY_INT |
+ NPY_UINT |
+ NPY_LONG |
+ NPY_ULONG |
+ NPY_LONGLONG |
+ NPY_ULONGLONG |
+ NPY_FLOAT |
+ NPY_DOUBLE |
+ NPY_LONGDOUBLE |
+ NPY_CFLOAT |
+ NPY_CDOUBLE |
+ NPY_CLONGDOUBLE |
+ NPY_OBJECT |
+ NPY_STRING |
+ NPY_UNICODE |
+ NPY_VOID |
+ NPY_NTYPES |
+ NPY_NOTYPE |
+ |
+ NPY_INT8 |
+ NPY_INT16 |
+ NPY_INT32 |
+ NPY_INT64 |
+ NPY_INT128 |
+ NPY_INT256 |
+ NPY_UINT8 |
+ NPY_UINT16 |
+ NPY_UINT32 |
+ NPY_UINT64 |
+ NPY_UINT128 |
+ NPY_UINT256 |
+ NPY_FLOAT16 |
+ NPY_FLOAT32 |
+ NPY_FLOAT64 |
+ NPY_FLOAT80 |
+ NPY_FLOAT96 |
+ NPY_FLOAT128 |
+ NPY_FLOAT256 |
+ NPY_COMPLEX32 |
+ NPY_COMPLEX64 |
+ NPY_COMPLEX128 |
+ NPY_COMPLEX160 |
+ NPY_COMPLEX192 |
+ NPY_COMPLEX256 |
+ NPY_COMPLEX512 |
+ |
+ NPY_INTP |
+ |
+ ctypedef enum NPY_ORDER: |
+ NPY_ANYORDER |
+ NPY_CORDER |
+ NPY_FORTRANORDER |
+ |
+ ctypedef enum NPY_CLIPMODE: |
+ NPY_CLIP |
+ NPY_WRAP |
+ NPY_RAISE |
+ |
+ ctypedef enum NPY_SCALARKIND: |
+ NPY_NOSCALAR, |
+ NPY_BOOL_SCALAR, |
+ NPY_INTPOS_SCALAR, |
+ NPY_INTNEG_SCALAR, |
+ NPY_FLOAT_SCALAR, |
+ NPY_COMPLEX_SCALAR, |
+ NPY_OBJECT_SCALAR |
+ |
+ ctypedef enum NPY_SORTKIND: |
+ NPY_QUICKSORT |
+ NPY_HEAPSORT |
+ NPY_MERGESORT |
+ |
+ ctypedef enum NPY_SEARCHSIDE: |
+ NPY_SEARCHLEFT |
+ NPY_SEARCHRIGHT |
+ |
+ enum: |
+ NPY_C_CONTIGUOUS |
+ NPY_F_CONTIGUOUS |
+ NPY_CONTIGUOUS |
+ NPY_FORTRAN |
+ NPY_OWNDATA |
+ NPY_FORCECAST |
+ NPY_ENSURECOPY |
+ NPY_ENSUREARRAY |
+ NPY_ELEMENTSTRIDES |
+ NPY_ALIGNED |
+ NPY_NOTSWAPPED |
+ NPY_WRITEABLE |
+ NPY_UPDATEIFCOPY |
+ NPY_ARR_HAS_DESCR |
+ |
+ NPY_BEHAVED |
+ NPY_BEHAVED_NS |
+ NPY_CARRAY |
+ NPY_CARRAY_RO |
+ NPY_FARRAY |
+ NPY_FARRAY_RO |
+ NPY_DEFAULT |
+ |
+ NPY_IN_ARRAY |
+ NPY_OUT_ARRAY |
+ NPY_INOUT_ARRAY |
+ NPY_IN_FARRAY |
+ NPY_OUT_FARRAY |
+ NPY_INOUT_FARRAY |
+ |
+ NPY_UPDATE_ALL |
+ |
+ cdef enum: |
+ NPY_MAXDIMS |
+ |
+ npy_intp NPY_MAX_ELSIZE |
+ |
+ ctypedef void (*PyArray_VectorUnaryFunc)(void *, void *, npy_intp, void *, void *) |
+ |
+ ctypedef class numpy.dtype [object PyArray_Descr]: |
+ # Use PyDataType_* macros when possible, however there are no macros |
+ # for accessing some of the fields, so some are defined. Please |
+ # ask on cython-dev if you need more. |
+ cdef int type_num |
+ cdef int itemsize "elsize" |
+ cdef char byteorder |
+ cdef object fields |
+ cdef tuple names |
+ |
+ ctypedef extern class numpy.flatiter [object PyArrayIterObject]: |
+ # Use through macros |
+ pass |
+ |
+ ctypedef extern class numpy.broadcast [object PyArrayMultiIterObject]: |
+ # Use through macros |
+ pass |
+ |
+ ctypedef struct PyArrayObject: |
+ # For use in situations where ndarray can't replace PyArrayObject*, |
+ # like PyArrayObject**. |
+ pass |
+ |
+ ctypedef class numpy.ndarray [object PyArrayObject]: |
+ cdef __cythonbufferdefaults__ = {"mode": "strided"} |
+ |
+ cdef: |
+ # Only taking a few of the most commonly used and stable fields. |
+ # One should use PyArray_* macros instead to access the C fields. |
+ char *data |
+ int ndim "nd" |
+ npy_intp *shape "dimensions" |
+ npy_intp *strides |
+ dtype descr |
+ PyObject* base |
+ |
+ # Note: This syntax (function definition in pxd files) is an |
+ # experimental exception made for __getbuffer__ and __releasebuffer__ |
+ # -- the details of this may change. |
+ def __getbuffer__(ndarray self, Py_buffer* info, int flags): |
+ # This implementation of getbuffer is geared towards Cython |
+ # requirements, and does not yet fullfill the PEP. |
+ # In particular strided access is always provided regardless |
+ # of flags |
+ |
+ if info == NULL: return |
+ |
+ cdef int copy_shape, i, ndim |
+ cdef int endian_detector = 1 |
+ cdef bint little_endian = ((<char*>&endian_detector)[0] != 0) |
+ |
+ ndim = PyArray_NDIM(self) |
+ |
+ if sizeof(npy_intp) != sizeof(Py_ssize_t): |
+ copy_shape = 1 |
+ else: |
+ copy_shape = 0 |
+ |
+ if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS) |
+ and not PyArray_CHKFLAGS(self, NPY_C_CONTIGUOUS)): |
+ raise ValueError(u"ndarray is not C contiguous") |
+ |
+ if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) |
+ and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): |
+ raise ValueError(u"ndarray is not Fortran contiguous") |
+ |
+ info.buf = PyArray_DATA(self) |
+ info.ndim = ndim |
+ if copy_shape: |
+ # Allocate new buffer for strides and shape info. |
+ # This is allocated as one block, strides first. |
+ info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2) |
+ info.shape = info.strides + ndim |
+ for i in range(ndim): |
+ info.strides[i] = PyArray_STRIDES(self)[i] |
+ info.shape[i] = PyArray_DIMS(self)[i] |
+ else: |
+ info.strides = <Py_ssize_t*>PyArray_STRIDES(self) |
+ info.shape = <Py_ssize_t*>PyArray_DIMS(self) |
+ info.suboffsets = NULL |
+ info.itemsize = PyArray_ITEMSIZE(self) |
+ info.readonly = not PyArray_ISWRITEABLE(self) |
+ |
+ cdef int t |
+ cdef char* f = NULL |
+ cdef dtype descr = self.descr |
+ cdef list stack |
+ cdef int offset |
+ |
+ cdef bint hasfields = PyDataType_HASFIELDS(descr) |
+ |
+ if not hasfields and not copy_shape: |
+ # do not call releasebuffer |
+ info.obj = None |
+ else: |
+ # need to call releasebuffer |
+ info.obj = self |
+ |
+ if not hasfields: |
+ t = descr.type_num |
+ if ((descr.byteorder == c'>' and little_endian) or |
+ (descr.byteorder == c'<' and not little_endian)): |
+ raise ValueError(u"Non-native byte order not supported") |
+ if t == NPY_BYTE: f = "b" |
+ elif t == NPY_UBYTE: f = "B" |
+ elif t == NPY_SHORT: f = "h" |
+ elif t == NPY_USHORT: f = "H" |
+ elif t == NPY_INT: f = "i" |
+ elif t == NPY_UINT: f = "I" |
+ elif t == NPY_LONG: f = "l" |
+ elif t == NPY_ULONG: f = "L" |
+ elif t == NPY_LONGLONG: f = "q" |
+ elif t == NPY_ULONGLONG: f = "Q" |
+ elif t == NPY_FLOAT: f = "f" |
+ elif t == NPY_DOUBLE: f = "d" |
+ elif t == NPY_LONGDOUBLE: f = "g" |
+ elif t == NPY_CFLOAT: f = "Zf" |
+ elif t == NPY_CDOUBLE: f = "Zd" |
+ elif t == NPY_CLONGDOUBLE: f = "Zg" |
+ elif t == NPY_OBJECT: f = "O" |
+ else: |
+ raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t) |
+ info.format = f |
+ return |
+ else: |
+ info.format = <char*>stdlib.malloc(_buffer_format_string_len) |
+ info.format[0] = c'^' # Native data types, manual alignment |
+ offset = 0 |
+ f = _util_dtypestring(descr, info.format + 1, |
+ info.format + _buffer_format_string_len, |
+ &offset) |
+ f[0] = c'\0' # Terminate format string |
+ |
+ def __releasebuffer__(ndarray self, Py_buffer* info): |
+ if PyArray_HASFIELDS(self): |
+ stdlib.free(info.format) |
+ if sizeof(npy_intp) != sizeof(Py_ssize_t): |
+ stdlib.free(info.strides) |
+ # info.shape was stored after info.strides in the same block |
+ |
+ |
+ ctypedef unsigned char npy_bool |
+ |
+ ctypedef signed char npy_byte |
+ ctypedef signed short npy_short |
+ ctypedef signed int npy_int |
+ ctypedef signed long npy_long |
+ ctypedef signed long long npy_longlong |
+ |
+ ctypedef unsigned char npy_ubyte |
+ ctypedef unsigned short npy_ushort |
+ ctypedef unsigned int npy_uint |
+ ctypedef unsigned long npy_ulong |
+ ctypedef unsigned long long npy_ulonglong |
+ |
+ ctypedef float npy_float |
+ ctypedef double npy_double |
+ ctypedef long double npy_longdouble |
+ |
+ ctypedef signed char npy_int8 |
+ ctypedef signed short npy_int16 |
+ ctypedef signed int npy_int32 |
+ ctypedef signed long long npy_int64 |
+ ctypedef signed long long npy_int96 |
+ ctypedef signed long long npy_int128 |
+ |
+ ctypedef unsigned char npy_uint8 |
+ ctypedef unsigned short npy_uint16 |
+ ctypedef unsigned int npy_uint32 |
+ ctypedef unsigned long long npy_uint64 |
+ ctypedef unsigned long long npy_uint96 |
+ ctypedef unsigned long long npy_uint128 |
+ |
+ ctypedef float npy_float32 |
+ ctypedef double npy_float64 |
+ ctypedef long double npy_float80 |
+ ctypedef long double npy_float96 |
+ ctypedef long double npy_float128 |
+ |
+ ctypedef struct npy_cfloat: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_cdouble: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_clongdouble: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_complex64: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_complex128: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_complex160: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_complex192: |
+ double real |
+ double imag |
+ |
+ ctypedef struct npy_complex256: |
+ double real |
+ double imag |
+ |
+ ctypedef struct PyArray_Dims: |
+ npy_intp *ptr |
+ int len |
+ |
+ void import_array() |
+ |
+ # |
+ # Macros from ndarrayobject.h |
+ # |
+ bint PyArray_CHKFLAGS(ndarray m, int flags) |
+ bint PyArray_ISCONTIGUOUS(ndarray m) |
+ bint PyArray_ISWRITEABLE(ndarray m) |
+ bint PyArray_ISALIGNED(ndarray m) |
+ |
+ int PyArray_NDIM(ndarray) |
+ bint PyArray_ISONESEGMENT(ndarray) |
+ bint PyArray_ISFORTRAN(ndarray) |
+ int PyArray_FORTRANIF(ndarray) |
+ |
+ void* PyArray_DATA(ndarray) |
+ char* PyArray_BYTES(ndarray) |
+ npy_intp* PyArray_DIMS(ndarray) |
+ npy_intp* PyArray_STRIDES(ndarray) |
+ npy_intp PyArray_DIM(ndarray, size_t) |
+ npy_intp PyArray_STRIDE(ndarray, size_t) |
+ |
+ # object PyArray_BASE(ndarray) wrong refcount semantics |
+ # dtype PyArray_DESCR(ndarray) wrong refcount semantics |
+ int PyArray_FLAGS(ndarray) |
+ npy_intp PyArray_ITEMSIZE(ndarray) |
+ int PyArray_TYPE(ndarray arr) |
+ |
+ object PyArray_GETITEM(ndarray arr, void *itemptr) |
+ int PyArray_SETITEM(ndarray arr, void *itemptr, object obj) |
+ |
+ bint PyTypeNum_ISBOOL(int) |
+ bint PyTypeNum_ISUNSIGNED(int) |
+ bint PyTypeNum_ISSIGNED(int) |
+ bint PyTypeNum_ISINTEGER(int) |
+ bint PyTypeNum_ISFLOAT(int) |
+ bint PyTypeNum_ISNUMBER(int) |
+ bint PyTypeNum_ISSTRING(int) |
+ bint PyTypeNum_ISCOMPLEX(int) |
+ bint PyTypeNum_ISPYTHON(int) |
+ bint PyTypeNum_ISFLEXIBLE(int) |
+ bint PyTypeNum_ISUSERDEF(int) |
+ bint PyTypeNum_ISEXTENDED(int) |
+ bint PyTypeNum_ISOBJECT(int) |
+ |
+ bint PyDataType_ISBOOL(dtype) |
+ bint PyDataType_ISUNSIGNED(dtype) |
+ bint PyDataType_ISSIGNED(dtype) |
+ bint PyDataType_ISINTEGER(dtype) |
+ bint PyDataType_ISFLOAT(dtype) |
+ bint PyDataType_ISNUMBER(dtype) |
+ bint PyDataType_ISSTRING(dtype) |
+ bint PyDataType_ISCOMPLEX(dtype) |
+ bint PyDataType_ISPYTHON(dtype) |
+ bint PyDataType_ISFLEXIBLE(dtype) |
+ bint PyDataType_ISUSERDEF(dtype) |
+ bint PyDataType_ISEXTENDED(dtype) |
+ bint PyDataType_ISOBJECT(dtype) |
+ bint PyDataType_HASFIELDS(dtype) |
+ |
+ bint PyArray_ISBOOL(ndarray) |
+ bint PyArray_ISUNSIGNED(ndarray) |
+ bint PyArray_ISSIGNED(ndarray) |
+ bint PyArray_ISINTEGER(ndarray) |
+ bint PyArray_ISFLOAT(ndarray) |
+ bint PyArray_ISNUMBER(ndarray) |
+ bint PyArray_ISSTRING(ndarray) |
+ bint PyArray_ISCOMPLEX(ndarray) |
+ bint PyArray_ISPYTHON(ndarray) |
+ bint PyArray_ISFLEXIBLE(ndarray) |
+ bint PyArray_ISUSERDEF(ndarray) |
+ bint PyArray_ISEXTENDED(ndarray) |
+ bint PyArray_ISOBJECT(ndarray) |
+ bint PyArray_HASFIELDS(ndarray) |
+ |
+ bint PyArray_ISVARIABLE(ndarray) |
+ |
+ bint PyArray_SAFEALIGNEDCOPY(ndarray) |
+ bint PyArray_ISNBO(char) # works on ndarray.byteorder |
+ bint PyArray_IsNativeByteOrder(char) # works on ndarray.byteorder |
+ bint PyArray_ISNOTSWAPPED(ndarray) |
+ bint PyArray_ISBYTESWAPPED(ndarray) |
+ |
+ bint PyArray_FLAGSWAP(ndarray, int) |
+ |
+ bint PyArray_ISCARRAY(ndarray) |
+ bint PyArray_ISCARRAY_RO(ndarray) |
+ bint PyArray_ISFARRAY(ndarray) |
+ bint PyArray_ISFARRAY_RO(ndarray) |
+ bint PyArray_ISBEHAVED(ndarray) |
+ bint PyArray_ISBEHAVED_RO(ndarray) |
+ |
+ |
+ bint PyDataType_ISNOTSWAPPED(dtype) |
+ bint PyDataType_ISBYTESWAPPED(dtype) |
+ |
+ bint PyArray_DescrCheck(object) |
+ |
+ bint PyArray_Check(object) |
+ bint PyArray_CheckExact(object) |
+ |
+ # Cannot be supported due to out arg: |
+ # bint PyArray_HasArrayInterfaceType(object, dtype, object, object&) |
+ # bint PyArray_HasArrayInterface(op, out) |
+ |
+ |
+ bint PyArray_IsZeroDim(object) |
+ # Cannot be supported due to ## ## in macro: |
+ # bint PyArray_IsScalar(object, verbatim work) |
+ bint PyArray_CheckScalar(object) |
+ bint PyArray_IsPythonNumber(object) |
+ bint PyArray_IsPythonScalar(object) |
+ bint PyArray_IsAnyScalar(object) |
+ bint PyArray_CheckAnyScalar(object) |
+ ndarray PyArray_GETCONTIGUOUS(ndarray) |
+ bint PyArray_SAMESHAPE(ndarray, ndarray) |
+ npy_intp PyArray_SIZE(ndarray) |
+ npy_intp PyArray_NBYTES(ndarray) |
+ |
+ object PyArray_FROM_O(object) |
+ object PyArray_FROM_OF(object m, int flags) |
+ object PyArray_FROM_OT(object m, int type) |
+ object PyArray_FROM_OTF(object m, int type, int flags) |
+ object PyArray_FROMANY(object m, int type, int min, int max, int flags) |
+ object PyArray_ZEROS(int nd, npy_intp* dims, int type, int fortran) |
+ object PyArray_EMPTY(int nd, npy_intp* dims, int type, int fortran) |
+ void PyArray_FILLWBYTE(object, int val) |
+ npy_intp PyArray_REFCOUNT(object) |
+ object PyArray_ContiguousFromAny(op, int, int min_depth, int max_depth) |
+ unsigned char PyArray_EquivArrTypes(ndarray a1, ndarray a2) |
+ bint PyArray_EquivByteorders(int b1, int b2) |
+ object PyArray_SimpleNew(int nd, npy_intp* dims, int typenum) |
+ object PyArray_SimpleNewFromData(int nd, npy_intp* dims, int typenum, void* data) |
+ #object PyArray_SimpleNewFromDescr(int nd, npy_intp* dims, dtype descr) |
+ object PyArray_ToScalar(void* data, ndarray arr) |
+ |
+ void* PyArray_GETPTR1(ndarray m, npy_intp i) |
+ void* PyArray_GETPTR2(ndarray m, npy_intp i, npy_intp j) |
+ void* PyArray_GETPTR3(ndarray m, npy_intp i, npy_intp j, npy_intp k) |
+ void* PyArray_GETPTR4(ndarray m, npy_intp i, npy_intp j, npy_intp k, npy_intp l) |
+ |
+ void PyArray_XDECREF_ERR(ndarray) |
+ # Cannot be supported due to out arg |
+ # void PyArray_DESCR_REPLACE(descr) |
+ |
+ |
+ object PyArray_Copy(ndarray) |
+ object PyArray_FromObject(object op, int type, int min_depth, int max_depth) |
+ object PyArray_ContiguousFromObject(object op, int type, int min_depth, int max_depth) |
+ object PyArray_CopyFromObject(object op, int type, int min_depth, int max_depth) |
+ |
+ object PyArray_Cast(ndarray mp, int type_num) |
+ object PyArray_Take(ndarray ap, object items, int axis) |
+ object PyArray_Put(ndarray ap, object items, object values) |
+ |
+ void PyArray_ITER_RESET(flatiter it) nogil |
+ void PyArray_ITER_NEXT(flatiter it) nogil |
+ void PyArray_ITER_GOTO(flatiter it, npy_intp* destination) nogil |
+ void PyArray_ITER_GOTO1D(flatiter it, npy_intp ind) nogil |
+ void* PyArray_ITER_DATA(flatiter it) nogil |
+ bint PyArray_ITER_NOTDONE(flatiter it) nogil |
+ |
+ void PyArray_MultiIter_RESET(broadcast multi) nogil |
+ void PyArray_MultiIter_NEXT(broadcast multi) nogil |
+ void PyArray_MultiIter_GOTO(broadcast multi, npy_intp dest) nogil |
+ void PyArray_MultiIter_GOTO1D(broadcast multi, npy_intp ind) nogil |
+ void* PyArray_MultiIter_DATA(broadcast multi, npy_intp i) nogil |
+ void PyArray_MultiIter_NEXTi(broadcast multi, npy_intp i) nogil |
+ bint PyArray_MultiIter_NOTDONE(broadcast multi) nogil |
+ |
+ # Functions from __multiarray_api.h |
+ |
+ # Functions taking dtype and returning object/ndarray are disabled |
+ # for now as they steal dtype references. I'm conservative and disable |
+ # more than is probably needed until it can be checked further. |
+ int PyArray_SetNumericOps (object) |
+ object PyArray_GetNumericOps () |
+ int PyArray_INCREF (ndarray) |
+ int PyArray_XDECREF (ndarray) |
+ void PyArray_SetStringFunction (object, int) |
+ dtype PyArray_DescrFromType (int) |
+ object PyArray_TypeObjectFromType (int) |
+ char * PyArray_Zero (ndarray) |
+ char * PyArray_One (ndarray) |
+ #object PyArray_CastToType (ndarray, dtype, int) |
+ int PyArray_CastTo (ndarray, ndarray) |
+ int PyArray_CastAnyTo (ndarray, ndarray) |
+ int PyArray_CanCastSafely (int, int) |
+ npy_bool PyArray_CanCastTo (dtype, dtype) |
+ int PyArray_ObjectType (object, int) |
+ dtype PyArray_DescrFromObject (object, dtype) |
+ #ndarray* PyArray_ConvertToCommonType (object, int *) |
+ dtype PyArray_DescrFromScalar (object) |
+ dtype PyArray_DescrFromTypeObject (object) |
+ npy_intp PyArray_Size (object) |
+ #object PyArray_Scalar (void *, dtype, object) |
+ #object PyArray_FromScalar (object, dtype) |
+ void PyArray_ScalarAsCtype (object, void *) |
+ #int PyArray_CastScalarToCtype (object, void *, dtype) |
+ #int PyArray_CastScalarDirect (object, dtype, void *, int) |
+ object PyArray_ScalarFromObject (object) |
+ #PyArray_VectorUnaryFunc * PyArray_GetCastFunc (dtype, int) |
+ object PyArray_FromDims (int, int *, int) |
+ #object PyArray_FromDimsAndDataAndDescr (int, int *, dtype, char *) |
+ #object PyArray_FromAny (object, dtype, int, int, int, object) |
+ object PyArray_EnsureArray (object) |
+ object PyArray_EnsureAnyArray (object) |
+ #object PyArray_FromFile (stdio.FILE *, dtype, npy_intp, char *) |
+ #object PyArray_FromString (char *, npy_intp, dtype, npy_intp, char *) |
+ #object PyArray_FromBuffer (object, dtype, npy_intp, npy_intp) |
+ #object PyArray_FromIter (object, dtype, npy_intp) |
+ object PyArray_Return (ndarray) |
+ #object PyArray_GetField (ndarray, dtype, int) |
+ #int PyArray_SetField (ndarray, dtype, int, object) |
+ object PyArray_Byteswap (ndarray, npy_bool) |
+ object PyArray_Resize (ndarray, PyArray_Dims *, int, NPY_ORDER) |
+ int PyArray_MoveInto (ndarray, ndarray) |
+ int PyArray_CopyInto (ndarray, ndarray) |
+ int PyArray_CopyAnyInto (ndarray, ndarray) |
+ int PyArray_CopyObject (ndarray, object) |
+ object PyArray_NewCopy (ndarray, NPY_ORDER) |
+ object PyArray_ToList (ndarray) |
+ object PyArray_ToString (ndarray, NPY_ORDER) |
+ int PyArray_ToFile (ndarray, stdio.FILE *, char *, char *) |
+ int PyArray_Dump (object, object, int) |
+ object PyArray_Dumps (object, int) |
+ int PyArray_ValidType (int) |
+ void PyArray_UpdateFlags (ndarray, int) |
+ object PyArray_New (type, int, npy_intp *, int, npy_intp *, void *, int, int, object) |
+ #object PyArray_NewFromDescr (type, dtype, int, npy_intp *, npy_intp *, void *, int, object) |
+ #dtype PyArray_DescrNew (dtype) |
+ dtype PyArray_DescrNewFromType (int) |
+ double PyArray_GetPriority (object, double) |
+ object PyArray_IterNew (object) |
+ object PyArray_MultiIterNew (int, ...) |
+ |
+ int PyArray_PyIntAsInt (object) |
+ npy_intp PyArray_PyIntAsIntp (object) |
+ int PyArray_Broadcast (broadcast) |
+ void PyArray_FillObjectArray (ndarray, object) |
+ int PyArray_FillWithScalar (ndarray, object) |
+ npy_bool PyArray_CheckStrides (int, int, npy_intp, npy_intp, npy_intp *, npy_intp *) |
+ dtype PyArray_DescrNewByteorder (dtype, char) |
+ object PyArray_IterAllButAxis (object, int *) |
+ #object PyArray_CheckFromAny (object, dtype, int, int, int, object) |
+ #object PyArray_FromArray (ndarray, dtype, int) |
+ object PyArray_FromInterface (object) |
+ object PyArray_FromStructInterface (object) |
+ #object PyArray_FromArrayAttr (object, dtype, object) |
+ #NPY_SCALARKIND PyArray_ScalarKind (int, ndarray*) |
+ int PyArray_CanCoerceScalar (int, int, NPY_SCALARKIND) |
+ object PyArray_NewFlagsObject (object) |
+ npy_bool PyArray_CanCastScalar (type, type) |
+ #int PyArray_CompareUCS4 (npy_ucs4 *, npy_ucs4 *, register size_t) |
+ int PyArray_RemoveSmallest (broadcast) |
+ int PyArray_ElementStrides (object) |
+ void PyArray_Item_INCREF (char *, dtype) |
+ void PyArray_Item_XDECREF (char *, dtype) |
+ object PyArray_FieldNames (object) |
+ object PyArray_Transpose (ndarray, PyArray_Dims *) |
+ object PyArray_TakeFrom (ndarray, object, int, ndarray, NPY_CLIPMODE) |
+ object PyArray_PutTo (ndarray, object, object, NPY_CLIPMODE) |
+ object PyArray_PutMask (ndarray, object, object) |
+ object PyArray_Repeat (ndarray, object, int) |
+ object PyArray_Choose (ndarray, object, ndarray, NPY_CLIPMODE) |
+ int PyArray_Sort (ndarray, int, NPY_SORTKIND) |
+ object PyArray_ArgSort (ndarray, int, NPY_SORTKIND) |
+ object PyArray_SearchSorted (ndarray, object, NPY_SEARCHSIDE) |
+ object PyArray_ArgMax (ndarray, int, ndarray) |
+ object PyArray_ArgMin (ndarray, int, ndarray) |
+ object PyArray_Reshape (ndarray, object) |
+ object PyArray_Newshape (ndarray, PyArray_Dims *, NPY_ORDER) |
+ object PyArray_Squeeze (ndarray) |
+ #object PyArray_View (ndarray, dtype, type) |
+ object PyArray_SwapAxes (ndarray, int, int) |
+ object PyArray_Max (ndarray, int, ndarray) |
+ object PyArray_Min (ndarray, int, ndarray) |
+ object PyArray_Ptp (ndarray, int, ndarray) |
+ object PyArray_Mean (ndarray, int, int, ndarray) |
+ object PyArray_Trace (ndarray, int, int, int, int, ndarray) |
+ object PyArray_Diagonal (ndarray, int, int, int) |
+ object PyArray_Clip (ndarray, object, object, ndarray) |
+ object PyArray_Conjugate (ndarray, ndarray) |
+ object PyArray_Nonzero (ndarray) |
+ object PyArray_Std (ndarray, int, int, ndarray, int) |
+ object PyArray_Sum (ndarray, int, int, ndarray) |
+ object PyArray_CumSum (ndarray, int, int, ndarray) |
+ object PyArray_Prod (ndarray, int, int, ndarray) |
+ object PyArray_CumProd (ndarray, int, int, ndarray) |
+ object PyArray_All (ndarray, int, ndarray) |
+ object PyArray_Any (ndarray, int, ndarray) |
+ object PyArray_Compress (ndarray, object, int, ndarray) |
+ object PyArray_Flatten (ndarray, NPY_ORDER) |
+ object PyArray_Ravel (ndarray, NPY_ORDER) |
+ npy_intp PyArray_MultiplyList (npy_intp *, int) |
+ int PyArray_MultiplyIntList (int *, int) |
+ void * PyArray_GetPtr (ndarray, npy_intp*) |
+ int PyArray_CompareLists (npy_intp *, npy_intp *, int) |
+ #int PyArray_AsCArray (object*, void *, npy_intp *, int, dtype) |
+ #int PyArray_As1D (object*, char **, int *, int) |
+ #int PyArray_As2D (object*, char ***, int *, int *, int) |
+ int PyArray_Free (object, void *) |
+ #int PyArray_Converter (object, object*) |
+ int PyArray_IntpFromSequence (object, npy_intp *, int) |
+ object PyArray_Concatenate (object, int) |
+ object PyArray_InnerProduct (object, object) |
+ object PyArray_MatrixProduct (object, object) |
+ object PyArray_CopyAndTranspose (object) |
+ object PyArray_Correlate (object, object, int) |
+ int PyArray_TypestrConvert (int, int) |
+ #int PyArray_DescrConverter (object, dtype*) |
+ #int PyArray_DescrConverter2 (object, dtype*) |
+ int PyArray_IntpConverter (object, PyArray_Dims *) |
+ #int PyArray_BufferConverter (object, chunk) |
+ int PyArray_AxisConverter (object, int *) |
+ int PyArray_BoolConverter (object, npy_bool *) |
+ int PyArray_ByteorderConverter (object, char *) |
+ int PyArray_OrderConverter (object, NPY_ORDER *) |
+ unsigned char PyArray_EquivTypes (dtype, dtype) |
+ #object PyArray_Zeros (int, npy_intp *, dtype, int) |
+ #object PyArray_Empty (int, npy_intp *, dtype, int) |
+ object PyArray_Where (object, object, object) |
+ object PyArray_Arange (double, double, double, int) |
+ #object PyArray_ArangeObj (object, object, object, dtype) |
+ int PyArray_SortkindConverter (object, NPY_SORTKIND *) |
+ object PyArray_LexSort (object, int) |
+ object PyArray_Round (ndarray, int, ndarray) |
+ unsigned char PyArray_EquivTypenums (int, int) |
+ int PyArray_RegisterDataType (dtype) |
+ int PyArray_RegisterCastFunc (dtype, int, PyArray_VectorUnaryFunc *) |
+ int PyArray_RegisterCanCast (dtype, int, NPY_SCALARKIND) |
+ #void PyArray_InitArrFuncs (PyArray_ArrFuncs *) |
+ object PyArray_IntTupleFromIntp (int, npy_intp *) |
+ int PyArray_TypeNumFromName (char *) |
+ int PyArray_ClipmodeConverter (object, NPY_CLIPMODE *) |
+ #int PyArray_OutputConverter (object, ndarray*) |
+ object PyArray_BroadcastToShape (object, npy_intp *, int) |
+ void _PyArray_SigintHandler (int) |
+ void* _PyArray_GetSigintBuf () |
+ #int PyArray_DescrAlignConverter (object, dtype*) |
+ #int PyArray_DescrAlignConverter2 (object, dtype*) |
+ int PyArray_SearchsideConverter (object, void *) |
+ object PyArray_CheckAxis (ndarray, int *, int) |
+ npy_intp PyArray_OverflowMultiplyList (npy_intp *, int) |
+ int PyArray_CompareString (char *, char *, size_t) |
+ |
+ |
+# Typedefs that matches the runtime dtype objects in |
+# the numpy module. |
+ |
+# The ones that are commented out needs an IFDEF function |
+# in Cython to enable them only on the right systems. |
+ |
+ctypedef npy_int8 int8_t |
+ctypedef npy_int16 int16_t |
+ctypedef npy_int32 int32_t |
+ctypedef npy_int64 int64_t |
+#ctypedef npy_int96 int96_t |
+#ctypedef npy_int128 int128_t |
+ |
+ctypedef npy_uint8 uint8_t |
+ctypedef npy_uint16 uint16_t |
+ctypedef npy_uint32 uint32_t |
+ctypedef npy_uint64 uint64_t |
+#ctypedef npy_uint96 uint96_t |
+#ctypedef npy_uint128 uint128_t |
+ |
+ctypedef npy_float32 float32_t |
+ctypedef npy_float64 float64_t |
+#ctypedef npy_float80 float80_t |
+#ctypedef npy_float128 float128_t |
+ |
+ctypedef float complex complex64_t |
+ctypedef double complex complex128_t |
+ |
+# The int types are mapped a bit surprising -- |
+# numpy.int corresponds to 'l' and numpy.long to 'q' |
+ctypedef npy_long int_t |
+ctypedef npy_longlong long_t |
+ctypedef npy_longlong longlong_t |
+ |
+ctypedef npy_ulong uint_t |
+ctypedef npy_ulonglong ulong_t |
+ctypedef npy_ulonglong ulonglong_t |
+ |
+ctypedef npy_intp intp_t |
+ctypedef npy_uintp uintp_t |
+ |
+ctypedef npy_double float_t |
+ctypedef npy_double double_t |
+ctypedef npy_longdouble longdouble_t |
+ |
+ctypedef npy_cfloat cfloat_t |
+ctypedef npy_cdouble cdouble_t |
+ctypedef npy_clongdouble clongdouble_t |
+ |
+ctypedef npy_cdouble complex_t |
+ |
+cdef inline object PyArray_MultiIterNew1(a): |
+ return PyArray_MultiIterNew(1, <void*>a) |
+ |
+cdef inline object PyArray_MultiIterNew2(a, b): |
+ return PyArray_MultiIterNew(2, <void*>a, <void*>b) |
+ |
+cdef inline object PyArray_MultiIterNew3(a, b, c): |
+ return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c) |
+ |
+cdef inline object PyArray_MultiIterNew4(a, b, c, d): |
+ return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d) |
+ |
+cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): |
+ return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e) |
+ |
+cdef inline char* _util_dtypestring(dtype descr, char* f, char* end, int* offset) except NULL: |
+ # Recursive utility function used in __getbuffer__ to get format |
+ # string. The new location in the format string is returned. |
+ |
+ cdef dtype child |
+ cdef int delta_offset |
+ cdef tuple i |
+ cdef int endian_detector = 1 |
+ cdef bint little_endian = ((<char*>&endian_detector)[0] != 0) |
+ cdef tuple fields |
+ |
+ for childname in descr.names: |
+ fields = descr.fields[childname] |
+ child, new_offset = fields |
+ |
+ if (end - f) - <int>(new_offset - offset[0]) < 15: |
+ raise RuntimeError(u"Format string allocated too short, see comment in numpy.pxd") |
+ |
+ if ((child.byteorder == c'>' and little_endian) or |
+ (child.byteorder == c'<' and not little_endian)): |
+ raise ValueError(u"Non-native byte order not supported") |
+ # One could encode it in the format string and have Cython |
+ # complain instead, BUT: < and > in format strings also imply |
+ # standardized sizes for datatypes, and we rely on native in |
+ # order to avoid reencoding data types based on their size. |
+ # |
+ # A proper PEP 3118 exporter for other clients than Cython |
+ # must deal properly with this! |
+ |
+ # Output padding bytes |
+ while offset[0] < new_offset: |
+ f[0] = 120 # "x"; pad byte |
+ f += 1 |
+ offset[0] += 1 |
+ |
+ offset[0] += child.itemsize |
+ |
+ if not PyDataType_HASFIELDS(child): |
+ t = child.type_num |
+ if end - f < 5: |
+ raise RuntimeError(u"Format string allocated too short.") |
+ |
+ # Until ticket #99 is fixed, use integers to avoid warnings |
+ if t == NPY_BYTE: f[0] = 98 #"b" |
+ elif t == NPY_UBYTE: f[0] = 66 #"B" |
+ elif t == NPY_SHORT: f[0] = 104 #"h" |
+ elif t == NPY_USHORT: f[0] = 72 #"H" |
+ elif t == NPY_INT: f[0] = 105 #"i" |
+ elif t == NPY_UINT: f[0] = 73 #"I" |
+ elif t == NPY_LONG: f[0] = 108 #"l" |
+ elif t == NPY_ULONG: f[0] = 76 #"L" |
+ elif t == NPY_LONGLONG: f[0] = 113 #"q" |
+ elif t == NPY_ULONGLONG: f[0] = 81 #"Q" |
+ elif t == NPY_FLOAT: f[0] = 102 #"f" |
+ elif t == NPY_DOUBLE: f[0] = 100 #"d" |
+ elif t == NPY_LONGDOUBLE: f[0] = 103 #"g" |
+ elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf |
+ elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd |
+ elif t == NPY_CLONGDOUBLE: f[0] = 90; f[1] = 103; f += 1 # Zg |
+ elif t == NPY_OBJECT: f[0] = 79 #"O" |
+ else: |
+ raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t) |
+ f += 1 |
+ else: |
+ # Cython ignores struct boundary information ("T{...}"), |
+ # so don't output it |
+ f = _util_dtypestring(child, f, end, offset) |
+ return f |
+ |
+ |
+# |
+# ufunc API |
+# |
+ |
+cdef extern from "numpy/ufuncobject.h": |
+ |
+ ctypedef void (*PyUFuncGenericFunction) (char **, npy_intp *, npy_intp *, void *) |
+ |
+ ctypedef extern class numpy.ufunc [object PyUFuncObject]: |
+ cdef: |
+ int nin, nout, nargs |
+ int identity |
+ PyUFuncGenericFunction *functions |
+ void **data |
+ int ntypes |
+ int check_return |
+ char *name |
+ char *types |
+ char *doc |
+ void *ptr |
+ PyObject *obj |
+ PyObject *userloops |
+ |
+ cdef enum: |
+ PyUFunc_Zero |
+ PyUFunc_One |
+ PyUFunc_None |
+ UFUNC_ERR_IGNORE |
+ UFUNC_ERR_WARN |
+ UFUNC_ERR_RAISE |
+ UFUNC_ERR_CALL |
+ UFUNC_ERR_PRINT |
+ UFUNC_ERR_LOG |
+ UFUNC_MASK_DIVIDEBYZERO |
+ UFUNC_MASK_OVERFLOW |
+ UFUNC_MASK_UNDERFLOW |
+ UFUNC_MASK_INVALID |
+ UFUNC_SHIFT_DIVIDEBYZERO |
+ UFUNC_SHIFT_OVERFLOW |
+ UFUNC_SHIFT_UNDERFLOW |
+ UFUNC_SHIFT_INVALID |
+ UFUNC_FPE_DIVIDEBYZERO |
+ UFUNC_FPE_OVERFLOW |
+ UFUNC_FPE_UNDERFLOW |
+ UFUNC_FPE_INVALID |
+ UFUNC_ERR_DEFAULT |
+ UFUNC_ERR_DEFAULT2 |
+ |
+ object PyUFunc_FromFuncAndData(PyUFuncGenericFunction *, |
+ void **, char *, int, int, int, int, char *, char *, int) |
+ int PyUFunc_RegisterLoopForType(ufunc, int, |
+ PyUFuncGenericFunction, int *, void *) |
+ int PyUFunc_GenericFunction \ |
+ (ufunc, PyObject *, PyObject *, PyArrayObject **) |
+ void PyUFunc_f_f_As_d_d \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_d_d \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_f_f \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_g_g \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_F_F_As_D_D \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_F_F \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_D_D \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_G_G \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_O_O \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_ff_f_As_dd_d \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_ff_f \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_dd_d \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_gg_g \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_FF_F_As_DD_D \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_DD_D \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_FF_F \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_GG_G \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_OO_O \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_O_O_method \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_OO_O_method \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ void PyUFunc_On_Om \ |
+ (char **, npy_intp *, npy_intp *, void *) |
+ int PyUFunc_GetPyValues \ |
+ (char *, int *, int *, PyObject **) |
+ int PyUFunc_checkfperr \ |
+ (int, PyObject *, int *) |
+ void PyUFunc_clearfperr() |
+ int PyUFunc_getfperr() |
+ int PyUFunc_handlefperr \ |
+ (int, PyObject *, int, int *) |
+ int PyUFunc_ReplaceLoopBySignature \ |
+ (ufunc, PyUFuncGenericFunction, int *, PyUFuncGenericFunction *) |
+ object PyUFunc_FromFuncAndDataAndSignature \ |
+ (PyUFuncGenericFunction *, void **, char *, int, int, int, |
+ int, char *, char *, int, char *) |
+ |
+ void import_ufunc() |
+ |
+ |
+cdef inline void set_array_base(ndarray arr, object base): |
+ cdef PyObject* baseptr |
+ if base is None: |
+ baseptr = NULL |
+ else: |
+ Py_INCREF(base) # important to do this before decref below! |
+ baseptr = <PyObject*>base |
+ Py_XDECREF(arr.base) |
+ arr.base = baseptr |
+ |
+cdef inline object get_array_base(ndarray arr): |
+ if arr.base is NULL: |
+ return None |
+ else: |
+ return <object>arr.base |